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  5. Pnu_g32937

Pnu_g32937


Description : deubiquitinase & original description: none


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g32937

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0041.g026790 No alias deubiquitinase & original description: CDS=431-1120 0.02 OrthoFinder output from all 47 species
Dac_g03671 No alias deubiquitinase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429895g0010 No alias peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Nbi_g07751 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05394 No alias deubiquiTinase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039146_P005 Zm00001e039146 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 53 187
No external refs found!