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  5. Pnu_g32909

Pnu_g32909


Description : E3 ubiquitin ligase component *(Doa10) of ER-associated protein degradation (ERAD) machinery & original description: none


Gene families : OG0001940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g32909
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Als_g38475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49937 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.02 OrthoFinder output from all 47 species
Aob_g08474 No alias E3 ubiquitin ligase component *(Doa10) of ER-associated... 0.03 OrthoFinder output from all 47 species
LOC_Os06g43210.1 LOC_Os06g43210 ubiquitin ligase component Doa10 of ER-associated... 0.02 OrthoFinder output from all 47 species
MA_15237g0010 No alias ubiquitin ligase component Doa10 of ER-associated... 0.03 OrthoFinder output from all 47 species
Solyc01g020190.2.1 Solyc01g020190 Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e030477_P001 Zm00001e030477 ubiquitin ligase component Doa10 of ER-associated... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 46 92
No external refs found!