LOC_Os01g42380 (Os01g0609300)


Aliases : Os01g0609300

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g42380
Cluster HCCA cluster: Cluster_323

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017204001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01036184001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os01g52560 Os01g0724500 No description available 0.03 Gene family
MA_10427561g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_135152g0010 No alias No description available 0.02 Gene family
MA_18770g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
MA_42871g0010 No alias No description available 0.02 Gene family
MA_954551g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo172580 PACid_15412742 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo235359 PACid_15405313 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo426328 PACid_15407177 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d031724 GRMZM2G477872 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d044443 GRMZM2G143139 34.16 transport.ABC transporters and multidrug... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013525 ABC_2_trans 516 727
IPR013525 ABC_2_trans 1185 1399
IPR003439 ABC_transporter-like 180 362
IPR029481 ABC_trans_N 105 154
IPR013581 PDR_assoc 733 798
IPR003439 ABC_transporter-like 888 1040
No external refs found!