Gb_41440


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0012763 (LandPlants) Phylogenetic Tree(s): OG_02_0012763_tree ,
OG_03_0013698 (SeedPlants) Phylogenetic Tree(s): OG_03_0013698_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41440
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00046970 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.03 Archaeplastida
AT1G73100 SUVH3, SDG19 SU(VAR)3-9 homolog 3 0.03 Archaeplastida
AT2G33290 ATSUVH2, SDG3, SUVH2 SU(VAR)3-9 homolog 2 0.03 Archaeplastida
LOC_Os08g45130.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
LOC_Os11g03700.1 No alias class V/Su(var) histone methyltransferase component of... 0.03 Archaeplastida
LOC_Os11g38900.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Pp3c2_30830V3.1 No alias SU(VAR)3-9 homolog 6 0.02 Archaeplastida
Solyc08g077940.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.04 Archaeplastida
Solyc10g077070.2.1 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Zm00001e033130_P002 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003105 SRA_YDG 222 379
IPR001214 SET_dom 519 646
IPR007728 Pre-SET_dom 403 499
No external refs found!