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  5. Pnu_g32452

Pnu_g32452 (ATU2AF65A)


Aliases : ATU2AF65A

Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none


Gene families : OG0000716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pnu_g32452
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00267190 ATU2AF65A,... RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Als_g10024 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Aob_g13589 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Aop_g11505 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.05 OrthoFinder output from all 47 species
Aop_g12279 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Aop_g31028 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63493.t3 ATU2AF65A,... large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Azfi_s0089.g042568 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Azfi_s0262.g060793 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Cre09.g391949 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Dac_g14505 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Dcu_g07575 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Dde_g11336 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
GSVIVT01018993001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 OrthoFinder output from all 47 species
Len_g30816 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.04 OrthoFinder output from all 47 species
Lfl_g19286 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Lfl_g19287 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.04 OrthoFinder output from all 47 species
MA_10429502g0010 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.03 OrthoFinder output from all 47 species
Nbi_g35208 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Pnu_g25870 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005246 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.02 OrthoFinder output from all 47 species
Sam_g09275 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Solyc02g062920.3.1 ATU2AF65A, Solyc02g062920 large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.03 OrthoFinder output from all 47 species
Solyc12g008750.3.1 Solyc12g008750 large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.02 OrthoFinder output from all 47 species
Spa_g18763 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.05 OrthoFinder output from all 47 species
Spa_g26890 ATU2AF65A large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Tin_g15579 No alias large subunit of U2AF pre-RNA splicing auxiliary factor... 0.03 OrthoFinder output from all 47 species
Zm00001e021119_P005 ATU2AF65A, Zm00001e021119 large subunit of U2AF pre-RNA splicing auxiliary factor complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 329 398
No external refs found!