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  5. Gb_41015

Gb_41015


Description : Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana (sp|q9stf3|pp265_arath : 574.0)


Gene families : OG_01_0018998 (Archaeplastida) Phylogenetic Tree(s): OG_01_0018998_tree ,
OG_02_0015480 (LandPlants) Phylogenetic Tree(s): OG_02_0015480_tree ,
OG_03_0015215 (SeedPlants) Phylogenetic Tree(s): OG_03_0015215_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41015
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011887001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
Solyc05g009400.3.1 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.03 Archaeplastida
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01011887001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 LandPlants
Solyc05g009400.3.1 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.04 LandPlants
AT1G13410 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 SeedPlants
GSVIVT01011887001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 SeedPlants
Solyc05g009400.3.1 No alias Pentatricopeptide repeat-containing protein At3g29230... 0.04 SeedPlants
Solyc10g080220.2.1 No alias Putative pentatricopeptide repeat-containing protein... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 509 633
IPR002885 Pentatricopeptide_repeat 134 182
IPR002885 Pentatricopeptide_repeat 235 281
IPR002885 Pentatricopeptide_repeat 336 383
IPR002885 Pentatricopeptide_repeat 411 434
IPR002885 Pentatricopeptide_repeat 200 232
No external refs found!