AMTR_s00003p00142040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.110

Description : RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor


Gene families : OG_01_0000601 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000601_tree ,
OG_02_0025946 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0024273 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00142040
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015571001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 Archaeplastida
GSVIVT01017343001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 Archaeplastida
Gb_27991 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
MA_366520g0010 No alias Protein TPR2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c9_21250V3.1 No alias TOPLESS-related 1 0.02 Archaeplastida
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 156 190
IPR001680 WD40_repeat 618 655
IPR001680 WD40_repeat 53 82
IPR001680 WD40_repeat 195 232
No external refs found!