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  5. Pnu_g32109

Pnu_g32109


Description : not classified & original description: none


Gene families : OG0000662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000662_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g32109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00131570 evm_27.TU.AmTr_v1... Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Aev_g18685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16261 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
Gb_33797 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Gb_34217 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_20531g0020 No alias Clavaminate synthase-like protein At3g21360... 0.02 OrthoFinder output from all 47 species
MA_867753g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
MA_938243g0010 No alias Clavaminate synthase-like protein At3g21360... 0.03 OrthoFinder output from all 47 species
Smo425605 No alias Clavaminate synthase-like protein At3g21360... 0.04 OrthoFinder output from all 47 species
Zm00001e016597_P001 Zm00001e016597 Clavaminate synthase-like protein At3g21360... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 57 327
No external refs found!