LOC_Os01g31610 (Os01g0500900)


Aliases : Os01g0500900

Description : 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO DEFECTIVE 2768 (emb2768)


Gene families : OG_01_0006074 (Gene family) Phylogenetic Tree(s): OG0006074_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g31610
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001388.17 No alias 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.02 Gene family
Cre13.g606050 No alias 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.04 Gene family
GSVIVT01023528001 No alias 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.02 Gene family
MA_766311g0010 No alias 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.03 Gene family
Smo111886 PACid_15413613 No description available 0.02 Gene family
Solyc07g008530.1.1 Solyc07g008530.1 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.03 Gene family
Zm00001d003430 GRMZM2G012404 29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 75 396
IPR002942 S4_RNA-bd 432 477
No external refs found!