LOC_Os01g28500 (Os01g0382400)


Aliases : Os01g0382400

Description : 20.1 stress.biotic PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive. pathogenesis-related gene 1 (PR1)


Gene families : OG_01_0000046 (Gene family) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g28500
Cluster HCCA cluster: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT2G14610 ATPR1, PR1, PR 1 pathogenesis-related gene 1 0.02 Gene family
AT4G07820 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Gene family
GSVIVT01036993001 No alias No description available 0.03 Gene family
GSVIVT01037011001 No alias No description available 0.02 Gene family
LOC_Os01g28450 Os01g0382000 No description available 0.03 Gene family
LOC_Os02g27300 Os02g0472500 No description available 0.03 Gene family
LOC_Os07g03580 Os07g0127500 No description available 0.02 Gene family
LOC_Os07g03600 Os07g0127700 No description available 0.03 Gene family
LOC_Os07g03710 Os07g0129200 No description available 0.02 Gene family
LOC_Os10g11500 Os10g0191300 20.1 stress.biotic PR1 gene expression is induced in... 0.02 Gene family
MA_10270775g0010 No alias 20.1 stress.biotic CAP (Cysteine-rich secretory... 0.03 Gene family
MA_10428480g0010 No alias No description available 0.03 Gene family
MA_501572g0010 No alias No description available 0.03 Gene family
MA_907632g0010 No alias No description available 0.03 Gene family
MA_9186130g0010 No alias No description available 0.02 Gene family
Smo76987 PACid_15419637 No description available 0.02 Gene family
Solyc00g174340.2.1 Solyc00g174340.2 20.1.7 stress.biotic.PR-proteins pathogenesis related... 0.03 Gene family
Solyc09g007020.2.1 Solyc09g007020.2 No description available 0.06 Gene family
Zm00001d009296 No alias 20.1 stress.biotic PR1 gene expression is induced in... 0.04 Gene family
Zm00001d018324 GRMZM2G008367 No description available 0.02 Gene family
Zm00001d018734 GRMZM2G456997 No description available 0.04 Gene family
Zm00001d018738 GRMZM2G465226 No description available 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR014044 CAP_domain 37 155
No external refs found!