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  5. LOC_Os01g23530

LOC_Os01g23530 (Os01g0337100)


Aliases : Os01g0337100

Description : 16.1.5 secondary metabolism.isoprenoids.terpenoids Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21 (TPS21)


Gene families : OG_01_0000052 (Gene family) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g23530
Cluster HCCA cluster: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014566001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
GSVIVT01036331001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.02 Gene family
LOC_Os03g24690 Os03g0361700,... 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
LOC_Os04g27540 Os04g0342800 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
LOC_Os04g27670 Os04g0344100 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family
Zm00001d024207 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan
MF GO:0010333 terpene synthase activity IEA InterProScan
MF GO:0016829 lyase activity IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 35 201
IPR005630 Terpene_synthase_metal-bd 232 490
No external refs found!