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  5. Pnu_g31703

Pnu_g31703 (SGT1A)


Aliases : SGT1A

Description : effector-triggered immunity co-regulator *(SGT1) & original description: none


Gene families : OG0002844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g31703

Target Alias Description ECC score Gene Family Method Actions
Aob_g05859 RPR1, EDM1,... effector-triggered immunity co-regulator *(SGT1) &... 0.02 OrthoFinder output from all 47 species
Ceric.1Z100300.1 SGT1A, Ceric.1Z100300 effector-triggered immunity co-regulator *(SGT1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR007699 SGS_dom 359 439
IPR019734 TPR_repeat 121 152
IPR007052 CS_dom 241 316
No external refs found!