ATMG00580 (NAD4)

Aliases : NAD4

Description : NADH dehydrogenase subunit 4

Gene families : OG0004828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004828_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATMG00580
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00060p00157590	evm_27.TU.AmTr_v1...	No description available	0.08	OrthoFinder output from all 47 species
Als_g59558	NAD4	component *(ND4/NQO13) of NADH dehydrogenase proton...	0.06	OrthoFinder output from all 47 species
Ceric.1Z123000.1	NAD4, Ceric.1Z123000	not classified & original description: pacid=50617108...	0.07	OrthoFinder output from all 47 species
Ceric.1Z196200.1	NAD4, Ceric.1Z196200	not classified & original description: pacid=50586507...	0.07	OrthoFinder output from all 47 species
Ceric.1Z237200.1	NAD4, Ceric.1Z237200	not classified & original description: pacid=50569352...	0.07	OrthoFinder output from all 47 species
Ceric.1Z247100.1	NAD4, Ceric.1Z247100	not classified & original description: pacid=50628393...	0.07	OrthoFinder output from all 47 species
Ceric.1Z258100.1	NAD4, Ceric.1Z258100	not classified & original description: pacid=50586472...	0.03	OrthoFinder output from all 47 species
Ceric.1Z258400.1	NAD4, Ceric.1Z258400	not classified & original description: pacid=50613711...	0.07	OrthoFinder output from all 47 species
Ceric.1Z287700.1	NAD4, Ceric.1Z287700	not classified & original description: pacid=50600406...	0.07	OrthoFinder output from all 47 species
Ceric.1Z293000.1	NAD4, Ceric.1Z293000	not classified & original description: pacid=50576966...	0.07	OrthoFinder output from all 47 species
Ceric.1Z303000.1	NAD4, Ceric.1Z303000	not classified & original description: pacid=50639163...	0.07	OrthoFinder output from all 47 species
Ceric.1Z308300.1	NAD4, Ceric.1Z308300	not classified & original description: pacid=50634939...	0.07	OrthoFinder output from all 47 species
Ceric.1Z312700.1	NAD4, Ceric.1Z312700	not classified & original description: pacid=50573471...	0.07	OrthoFinder output from all 47 species
Gb_07659	NAD4	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	0.04	OrthoFinder output from all 47 species
LOC_Os12g34094.1	NAD4, LOC_Os12g34094	NADH-ubiquinone oxidoreductase chain 4 OS=Triticum...	0.12	OrthoFinder output from all 47 species
Nbi_g17169	NAD4	component *(ND4/NQO13) of NADH dehydrogenase proton...	0.17	OrthoFinder output from all 47 species
Pp3c2_30660V3.1	Pp3c2_30660	NADH dehydrogenase subunit 4	0.02	OrthoFinder output from all 47 species
Pp3c6_27070V3.1	Pp3c6_27070	NADH dehydrogenase subunit 4	0.01	OrthoFinder output from all 47 species
Sam_g13523	No alias	component *(ND4/NQO13) of NADH dehydrogenase proton...	0.05	OrthoFinder output from all 47 species
Solyc00g013180.1.1	NAD4, Solyc00g013180	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	0.14	OrthoFinder output from all 47 species
Solyc00g500171.1.1	NAD4, Solyc00g500171	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis...	0.12	OrthoFinder output from all 47 species
Solyc00g500172.1.1	NAD4, Solyc00g500172	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	0.14	OrthoFinder output from all 47 species
Solyc00g500187.1.1	NAD4, Solyc00g500187	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Solyc00g500188.1.1	NAD4, Solyc00g500188	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis...	0.12	OrthoFinder output from all 47 species
Solyc00g500189.1.1	NAD4, Solyc00g500189	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	0.14	OrthoFinder output from all 47 species
Solyc00g500251.1.1	NAD4, Solyc00g500251	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Solyc00g500252.1.1	NAD4, Solyc00g500252	NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis...	0.12	OrthoFinder output from all 47 species
Solyc00g500253.1.1	NAD4, Solyc00g500253	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	0.14	OrthoFinder output from all 47 species
Solyc10g061990.3.1	NAD4, Solyc10g061990	NADH-ubiquinone oxidoreductase chain 4 OS=Brassica...	0.07	OrthoFinder output from all 47 species
Spa_g54446	NAD4	component *(ND4/NQO13) of NADH dehydrogenase proton...	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005739	mitochondrion	TAS	Interproscan
CC	GO:0005747	mitochondrial respiratory chain complex I	IDA	Interproscan
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	RCA	Interproscan
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
CC	GO:0030964	NADH dehydrogenase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0045271	respiratory chain complex I	None	Extended
BP	GO:0045333	cellular respiration	RCA	Interproscan
BP	GO:0045333	cellular respiration	TAS	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	TAS	Interproscan
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003727	single-stranded RNA binding	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
CC	GO:0005753	mitochondrial proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015232	heme transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
BP	GO:0042776	proton motive force-driven mitochondrial ATP synthesis	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
CC	GO:0045259	proton-transporting ATP synthase complex	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0050897	cobalt ion binding	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:1904949	ATPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001750	ND/Mrp_mem	138	422

External Links

No external refs found!

ATMG00580 (NAD4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation