ATCG00470 (ATPE)


Aliases : ATPE

Description : ATP synthase epsilon chain


Gene families : OG0007659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007659_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00470
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00184530 ATPB, PB,... Photosynthesis.photophosphorylation.ATP synthase... 0.06 OrthoFinder output from all 47 species
Aev_g00175 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.21 OrthoFinder output from all 47 species
Aob_g00470 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Ceric.09G048600.1 ATPE, Ceric.09G048600 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.16 OrthoFinder output from all 47 species
Ceric.1Z017800.1 ATPE, Ceric.1Z017800 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Ceric.1Z022100.1 ATPE, Ceric.1Z022100 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Ceric.1Z161900.1 ATPE, Ceric.1Z161900 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Ceric.24G001600.1 ATPE, Ceric.24G001600 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Dcu_g39139 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Gb_04062 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Gb_06833 ATPB, PB subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Gb_25936 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
LOC_Os01g58000.1 ATPE, LOC_Os01g58000 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.21 OrthoFinder output from all 47 species
LOC_Os03g55874.1 ATPB, PB, LOC_Os03g55874 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.19 OrthoFinder output from all 47 species
LOC_Os06g02980.1 ATPB, PB, LOC_Os06g02980 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39756.1 ATPE, LOC_Os06g39756 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species
LOC_Os12g19430.1 ATPE, LOC_Os12g19430 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.12 OrthoFinder output from all 47 species
Lfl_g18092 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.18 OrthoFinder output from all 47 species
Smo137774 ATPE Photosynthesis.photophosphorylation.ATP synthase... 0.11 OrthoFinder output from all 47 species
Solyc00g500140.1.1 ATPE, Solyc00g500140 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Zm00001e003900_P001 ATPE, Zm00001e003900 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Zm00001e042031_P001 ATPE, Zm00001e042031 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Zm00001e042052_P001 ATPE, Zm00001e042052 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Zm00001e042080_P001 ATPE, Zm00001e042080 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species
Zm00001e042096_P001 ATPE, Zm00001e042096 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription elongation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0042776 proton motive force-driven mitochondrial ATP synthesis TAS Interproscan
CC GO:0045259 proton-transporting ATP synthase complex TAS Interproscan
BP GO:0045333 cellular respiration TAS Interproscan
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism TAS Interproscan
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000312 plastid small ribosomal subunit IEP HCCA
CC GO:0000313 organellar ribosome IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005754 mitochondrial proton-transporting ATP synthase, catalytic core IEP HCCA
BP GO:0005983 starch catabolic process IEP HCCA
BP GO:0006175 dATP biosynthetic process IEP HCCA
BP GO:0006176 dATP biosynthetic process from ADP IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009153 purine deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009215 purine deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009216 purine deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
BP GO:0009265 2'-deoxyribonucleotide biosynthetic process IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009544 chloroplast ATP synthase complex IEP HCCA
CC GO:0009547 plastid ribosome IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
CC GO:0010319 stromule IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019692 deoxyribose phosphate metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042736 NADH kinase activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
MF GO:0045157 electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045267 proton-transporting ATP synthase, catalytic core IEP HCCA
BP GO:0046060 dATP metabolic process IEP HCCA
BP GO:0046385 deoxyribose phosphate biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
CC GO:0098807 chloroplast thylakoid membrane protein complex IEP HCCA
BP GO:1901419 regulation of response to alcohol IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1905957 regulation of cellular response to alcohol IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR020546 ATP_synth_F1_dsu/esu_N 3 81
IPR020547 ATP_synth_F1_esu_C 86 128
No external refs found!