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  5. AT5G67530

AT5G67530 (ATPUB49, PUB49)


Aliases : ATPUB49, PUB49

Description : plant U-box 49


Gene families : OG0006442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G67530

Target Alias Description ECC score Gene Family Method Actions
Cre10.g457000 ATPUB49, PUB49 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
LOC_Os03g10400.2 ATPUB49, PUB49,... protein folding catalyst 0.01 OrthoFinder output from all 47 species
Zm00001e000761_P001 ATPUB49, PUB49,... protein folding catalyst 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006457 protein folding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 345 495
No external refs found!