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AT5G65350 (HTR11)


Aliases : HTR11

Description : histone 3 11


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G65350
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168390 No alias Histone H3.2 OS=Pisum sativum 0.07 OrthoFinder output from all 47 species
Aev_g08007 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61760 No alias histone H3 variant *(CENH3) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene58554.t1 Aspi01Gene58554 histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0079.g038413 No alias histone *(H3) & original description: CDS=1-621 0.02 OrthoFinder output from all 47 species
Cba_g02423 No alias histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z286600.1 Ceric.1Z286600 not classified & original description: pacid=50632714... 0.03 OrthoFinder output from all 47 species
MA_10432805g0020 No alias histone (H3) 0.04 OrthoFinder output from all 47 species
MA_475294g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_74555g0010 No alias Histone H3.2 OS=Pisum sativum (sp|p68427|h32_pea : 98.2) 0.03 OrthoFinder output from all 47 species
Mp7g16200.1 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Pnu_g06060 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06094 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007202 No alias not classified & original description: CDS=224-661 0.02 OrthoFinder output from all 47 species
Spa_g25338 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0009554 megasporogenesis IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0043934 sporulation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!