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  5. AT5G65270

AT5G65270 (AtRABA4a, RABA4a)


Aliases : AtRABA4a, RABA4a

Description : RAB GTPase homolog A4A


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G65270

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g23100.1 AtRABA4a,... A-class RAB GTPase 0.06 OrthoFinder output from all 47 species
Len_g12448 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g28692 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428137g0010 AtRABA4a, RABA4a A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g06105 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g064020.3.1 RABA4D,... A-class RAB GTPase 0.08 OrthoFinder output from all 47 species
Solyc04g012180.4.1 AtRABA4a,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc11g010100.2.1 AtRABA4a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Spa_g51659 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012878_P002 AtRABA4a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e038828_P001 AtRABA4a,... A-class RAB GTPase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0016020 membrane IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005798 Golgi-associated vesicle IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
MF GO:0016004 phospholipase activator activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
MF GO:0060229 lipase activator activity IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 19 178
No external refs found!