AT5G65130

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G65130

Target	Alias	Description	ECC score	Gene Family Method
Aev_g21811	DEAR2	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene56619.t1	RAP2.1, Aspi01Gene56619	not classified & original description: none	0.01	OrthoFinder output from all 47 species
LOC_Os06g09790.1	ORA47, LOC_Os06g09790	Ethylene-responsive transcription factor ERF018...	0.01	OrthoFinder output from all 47 species
MA_904750g0010	No alias	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Solyc03g007460.3.1	CRF4, Solyc03g007460	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Solyc09g089920.1.1	Solyc09g089920	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Zm00001e035811_P001	PUCHI, Zm00001e035811	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	IC	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005102	signaling receptor binding	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
BP	GO:0009875	pollen-pistil interaction	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	111	159

External Links

No external refs found!

AT5G65130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation