AT5G64220

Description : Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains

Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G64220

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00038p00173360	CAMTA3, SR1,...	RNA biosynthesis.transcriptional activation.CAMTA...	0.02	OrthoFinder output from all 47 species
Adi_g026121	No alias	CAMTA-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g081423	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g085085	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g08814	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g07423	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07073	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene72267.t1	CAMTA3, SR1,...	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G055700.1	CAMTA3, SR1,...	CAMTA-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.31G019600.1	Ceric.31G019600	CAMTA-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g13973	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01002635001	No alias	No description available	0.04	OrthoFinder output from all 47 species
LOC_Os04g31900.1	LOC_Os04g31900	transcription factor (CAMTA)	0.03	OrthoFinder output from all 47 species
MA_10437014g0010	No alias	Calmodulin-binding transcription activator 2...	0.04	OrthoFinder output from all 47 species
Msp_g15357	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35915	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010659	No alias	CAMTA-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018623	No alias	CAMTA-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Smo441667	CAMTA3, SR1	RNA biosynthesis.transcriptional activation.CAMTA...	0.04	OrthoFinder output from all 47 species
Tin_g10857	CAMTA3, SR1	CAMTA-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IMP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020683	DUF3447	645	721
IPR000048	IQ_motif_EF-hand-BS	871	890
IPR000048	IQ_motif_EF-hand-BS	895	914
IPR005559	CG-1_dom	21	134

External Links

No external refs found!

AT5G64220

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation