LOC_Os01g20980 (Os01g0311800)

Aliases : Os01g0311800

Description : 10.8.1 cell wall.pectin*esterases.PME ATPMEPCRB

Gene families : OG_01_0005733 (Gene family) Phylogenetic Tree(s): OG0005733_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g20980
Cluster HCCA cluster: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028040001 No alias 10.8.1 cell wall.pectin*esterases.PME Plant... 0.04 Gene family
Zm00001d009899 No alias 10.8.1 cell wall.pectin*esterases.PME ATPMEPCRB 0.05 Gene family
Zm00001d040649 GRMZM2G119864 10.8.1 cell wall.pectin*esterases.PME ATPMEPCRB 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan
BP GO:0042545 cell wall modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 39 185
IPR000070 Pectinesterase_cat 242 541
No external refs found!