AT5G62490 (ATHVA22B, HVA22B)

Aliases : ATHVA22B, HVA22B

Description : HVA22 homologue B

Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G62490
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
Als_g53989	HVA22F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g17301	HVA22F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g31650	HVA22F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g31655	HVA22F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008576001	HVA22E, ATHVA22E	HVA22-like protein e OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_24347	HVA22F	HVA22-like protein f OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
LOC_Os08g36440.1	HVA22E,...	Protein HVA22 OS=Hordeum vulgare (sp\|q07764\|hva22_horvu : 197.0)	0.13	OrthoFinder output from all 47 species
MA_113124g0010	HVA22F	HVA22-like protein f OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_119472g0010	HVA22E, ATHVA22E	Protein HVA22 OS=Hordeum vulgare (sp\|q07764\|hva22_horvu : 152.0)	0.09	OrthoFinder output from all 47 species
MA_317474g0010	HVA22E, ATHVA22E	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_62010g0010	HVA22F	HVA22-like protein f OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Msp_g09973	HVA22F	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g37973	HVA22F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g00180	HVA22F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g37188	HVA22F	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g04615	HVA22F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01736	HVA22F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04158	HVA22F	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g50646	HVA22F	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo38761	HVA22E, ATHVA22E	Protein HVA22 OS=Hordeum vulgare	0.03	OrthoFinder output from all 47 species
Smo417586	No alias	No description available	0.03	OrthoFinder output from all 47 species
Solyc04g014420.4.1	HVA22E,...	Protein HVA22 OS=Hordeum vulgare (sp\|q07764\|hva22_horvu : 117.0)	0.01	OrthoFinder output from all 47 species
Solyc06g072680.4.1	HVA22E,...	Protein HVA22 OS=Hordeum vulgare (sp\|q07764\|hva22_horvu : 148.0)	0.08	OrthoFinder output from all 47 species
Solyc10g007820.3.1	HVA22F, Solyc10g007820	HVA22-like protein f OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc11g010930.2.1	HVA22E,...	HVA22-like protein d OS=Arabidopsis thaliana...	0.01	OrthoFinder output from all 47 species
Spa_g28839	HVA22F	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010162	seed dormancy process	RCA	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022611	dormancy process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	IEP	Interproscan
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000104	succinate dehydrogenase activity	IEP	HCCA
BP	GO:0000302	response to reactive oxygen species	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006121	mitochondrial electron transport, succinate to ubiquinone	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
BP	GO:0007029	endoplasmic reticulum organization	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008379	thioredoxin peroxidase activity	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010231	maintenance of seed dormancy	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016595	glutamate binding	IEP	HCCA
MF	GO:0016597	amino acid binding	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
CC	GO:0045281	succinate dehydrogenase complex	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
CC	GO:0071458	obsolete integral component of cytoplasmic side of endoplasmic reticulum membrane	IEP	HCCA
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	HCCA
BP	GO:0071786	endoplasmic reticulum tubular network organization	IEP	HCCA
BP	GO:0097437	maintenance of dormancy	IEP	HCCA
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	HCCA
MF	GO:0140824	thioredoxin-dependent peroxiredoxin activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004345	TB2_DP1_HVA22	29	105

External Links

No external refs found!

AT5G62490 (ATHVA22B, HVA22B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation