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  5. AT5G62330

AT5G62330


Description : BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT5G62340.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000683 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62330
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00166600 evm_27.TU.AmTr_v1... Pectinesterase inhibitor 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00034p00240210 evm_27.TU.AmTr_v1... Pectinesterase inhibitor 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G14890 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 OrthoFinder output from all 47 species
AT1G62770 No alias Plant invertase/pectin methylesterase inhibitor... 0.04 OrthoFinder output from all 47 species
AT4G25260 No alias Plant invertase/pectin methylesterase inhibitor... 0.05 OrthoFinder output from all 47 species
Ala_g23104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05816.t1 Aspi01Gene05816 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10108.t1 Aspi01Gene10108 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42840.t1 Aspi01Gene42840 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G055300.1 Ceric.23G055300 not classified & original description: pacid=50611304... 0.03 OrthoFinder output from all 47 species
Dac_g09927 PME26, ATPMEPCRC, ATPME26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03275 PME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018598001 No alias 21 kDa protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
Gb_08074 No alias 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 124.0) 0.04 OrthoFinder output from all 47 species
LOC_Os03g43820.1 LOC_Os03g43820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g61530.1 LOC_Os03g61530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g49760.1 LOC_Os06g49760 Pectinesterase inhibitor 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g10560.1 LOC_Os10g10560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g10620.1 LOC_Os10g10620 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g10700.1 LOC_Os10g10700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g36500.1 LOC_Os10g36500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g10919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434137g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_259720g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_53377g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5786376g0010 No alias Pectinesterase inhibitor 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g02648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17216 PME26, ATPMEPCRC, ATPME26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011667 No alias not classified & original description: CDS=1-669 0.04 OrthoFinder output from all 47 species
Smo413591 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g091100.2.1 Solyc01g091100 Pectinesterase inhibitor 7 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc01g091110.3.1 Solyc01g091110 Pectinesterase inhibitor 9 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Solyc03g083660.1.1 Solyc03g083660 Pectinesterase inhibitor 4 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc03g083720.1.1 Solyc03g083720 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 131.0) 0.02 OrthoFinder output from all 47 species
Solyc03g083770.1.1 Solyc03g083770 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 143.0) 0.04 OrthoFinder output from all 47 species
Solyc07g042390.3.1 Solyc07g042390 Pectinesterase inhibitor 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g007450.1.1 Solyc08g007450 Pectinesterase inhibitor 11 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Solyc10g018320.1.1 Solyc10g018320 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 129.0) 0.09 OrthoFinder output from all 47 species
Solyc10g018330.3.1 PME1, Solyc10g018330 Pectinesterase inhibitor 11 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc12g009270.1.1 Solyc12g009270 Pectinesterase inhibitor 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013251_P001 Zm00001e013251 Pectinesterase inhibitor 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e030193_P001 Zm00001e030193 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040484_P001 Zm00001e040484 Pectinesterase inhibitor 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!