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  5. AT5G62060

AT5G62060


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62060

Target Alias Description ECC score Gene Family Method Actions
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G30920 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.03 OrthoFinder output from all 47 species
AT1G31080 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G31090 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.04 OrthoFinder output from all 47 species
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G46840 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT1G53790 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G59690 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT1G61060 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT1G67130 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT1G71290 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT2G02890 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G21930 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT2G23160 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT2G40925 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G23960 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.2 OrthoFinder output from all 47 species
AT3G49450 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from all 47 species
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT3G56890 No alias F-box associated ubiquitination effector family protein 0.01 OrthoFinder output from all 47 species
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT4G11590 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from all 47 species
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G22791 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from all 47 species
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 32 73
IPR013187 F-box-assoc_dom_typ3 194 273
No external refs found!