AT5G60860 (AtRABA1f, RABA1f)

Aliases : AtRABA1f, RABA1f

Description : RAB GTPase homolog A1F

Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G60860

Target	Alias	Description	ECC score	Gene Family Method
Aop_g22189	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g00782	AtRABA5d, RABA5d	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g04872	AtRABA5a, RABA5a	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_15386g0010	AtRABA1f, RABA1f	A-class RAB GTPase	0.08	OrthoFinder output from all 47 species
Nbi_g04704	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g14192	AtRABA1f, RABA1f	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g29922	ARA-1, ATRABA5E,...	A-class RAB GTPase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0016192	vesicle-mediated transport	RCA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007623	circadian rhythm	IEP	HCCA
BP	GO:0048511	rhythmic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	15	175

External Links

No external refs found!