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  5. AT5G60610

AT5G60610


Description : F-box/RNI-like superfamily protein


Gene families : OG0004270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60610

Target Alias Description ECC score Gene Family Method Actions
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G55030 No alias RNI-like superfamily protein 0.1 OrthoFinder output from all 47 species
AT3G10750 No alias FBD domain family 0.09 OrthoFinder output from all 47 species
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.09 OrthoFinder output from all 47 species
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.07 OrthoFinder output from all 47 species
AT3G49040 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G49045 No alias No description available 0.04 OrthoFinder output from all 47 species
AT3G52690 No alias RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 OrthoFinder output from all 47 species
AT5G38570 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.05 OrthoFinder output from all 47 species
AT5G56325 No alias FBD-like domain family protein 0.06 OrthoFinder output from all 47 species
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.09 OrthoFinder output from all 47 species
AT5G56410 No alias Protein with RNI-like/FBD-like domains 0.06 OrthoFinder output from all 47 species
AT5G56430 No alias F-box/FBD-like domains containing protein 0.09 OrthoFinder output from all 47 species
AT5G56452 No alias FBD-like domain family protein 0.1 OrthoFinder output from all 47 species
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.09 OrthoFinder output from all 47 species
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.08 OrthoFinder output from all 47 species
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
InterPro domains Description Start Stop
IPR006566 FBD 343 385
IPR001810 F-box_dom 3 41
IPR013101 Leu-rich_rpt_2 147 172
No external refs found!