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Description : RING/U-box superfamily protein
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G60580 | |
| Cluster | HCCA: Cluster_220 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g06625 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g00200 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g69418 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g526883 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01016394001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41078 | No alias | RING-v-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| MA_10434983g0010 | No alias | RING-v-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43716 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g31283 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g06087 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031805_P001 | Zm00001e031805 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | HCCA |
| BP | GO:0006857 | oligopeptide transport | IEP | HCCA |
| BP | GO:0009607 | response to biotic stimulus | IEP | HCCA |
| BP | GO:0009624 | response to nematode | IEP | HCCA |
| MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015833 | peptide transport | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| BP | GO:0042886 | amide transport | IEP | HCCA |
| BP | GO:0043207 | response to external biotic stimulus | IEP | HCCA |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051707 | response to other organism | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 257 | 304 |
| No external refs found! |