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  5. AT5G59845

AT5G59845


Description : Gibberellin-regulated family protein


Gene families : OG0000541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G59845
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273070 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00095260 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
AT1G10588 No alias Gibberellin-regulated family protein 0.06 OrthoFinder output from all 47 species
AT2G30810 No alias Gibberellin-regulated family protein 0.04 OrthoFinder output from all 47 species
AT2G39540 No alias Gibberellin-regulated family protein 0.04 OrthoFinder output from all 47 species
Als_g03355 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12806 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12349.t1 Aspi01Gene12349 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G011200.1 GASA3, Ceric.07G011200 GASA precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G054400.1 Ceric.22G054400 GASA precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g21845 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g27039 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000168001 No alias Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
LOC_Os04g39110.1 LOC_Os04g39110 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
LOC_Os05g31280.1 LOC_Os05g31280 GASA precursor polypeptide 0.04 OrthoFinder output from all 47 species
Len_g09517 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45849 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433269g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_190475g0010 No alias GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Nbi_g17763 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25284 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25552 No alias GASA precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61575 GASA3 GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09640 No alias GASA precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09846 No alias GASA precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g007910.4.1 GASA4, Solyc06g007910 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc11g011210.2.1 GASA5, Solyc11g011210 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Solyc12g042520.3.1 Solyc12g042520 GASA precursor polypeptide 0.03 OrthoFinder output from all 47 species
Zm00001e004992_P001 Zm00001e004992 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0009739 response to gibberellin ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
MF GO:0010340 carboxyl-O-methyltransferase activity IEP HCCA
MF GO:0010341 gibberellin carboxyl-O-methyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003854 GASA 30 89
No external refs found!