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  5. AT5G59560

AT5G59560 (SRR1)


Aliases : SRR1

Description : sensitivity to red light reduced protein (SRR1)


Gene families : OG0004344 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G59560

Target Alias Description ECC score Gene Family Method Actions
Aob_g24424 No alias phytochrome signalling mediator *(SRR1) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g08657 SRR1 phytochrome signalling mediator *(SRR1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0007623 circadian rhythm IMP Interproscan
BP GO:0009585 red, far-red light phototransduction IMP Interproscan
BP GO:0010017 red or far-red light signaling pathway IMP Interproscan
BP GO:0042752 regulation of circadian rhythm IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012942 SRR1-like 103 156
No external refs found!