AT5G59200 (OTP80)


Aliases : OTP80

Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G59200

Target Alias Description ECC score Gene Family Method Actions
AT1G14470 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G25360 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G31430 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 OrthoFinder output from all 47 species
AT1G56690 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G74400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G25970 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G30700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G13230 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G43790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g034839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14740 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene30532.t1 Aspi01Gene30532 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35082.t1 Aspi01Gene35082 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene68766.t1 Aspi01Gene68766 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g03313 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g08335 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g44717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.08 OrthoFinder output from all 47 species
Len_g21323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07188 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g10630 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16060 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39566 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08857 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g10306 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11413 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12243 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12249 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13390 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27236 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g49137 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g56905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61912 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63648 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63876 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g12723 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g21500 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012420 No alias not classified & original description: CDS=519-2384 0.02 OrthoFinder output from all 47 species
Smo51483 CRR22 Pentatricopeptide repeat-containing protein At3g53360,... 0.02 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11102 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g17816 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20412 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23272 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23280 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0031425 chloroplast RNA processing IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 218 265
IPR002885 Pentatricopeptide_repeat 319 367
IPR002885 Pentatricopeptide_repeat 90 137
IPR002885 Pentatricopeptide_repeat 193 216
IPR002885 Pentatricopeptide_repeat 164 187
IPR002885 Pentatricopeptide_repeat 460 489
No external refs found!