AMTR_s00050p00034460 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00050.5

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG_01_0001434 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001434_tree ,
OG_02_0001016 (LandPlants) Phylogenetic Tree(s): OG_02_0001016_tree ,
OG_03_0001849 (SeedPlants) Phylogenetic Tree(s): OG_03_0001849_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00050p00034460
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Smo415432 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Zm00001e010188_P001 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Smo415432 No alias Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica 0.03 LandPlants
Zm00001e010188_P001 No alias Alpha-L-fucosidase 1 OS=Arabidopsis thaliana... 0.05 LandPlants
AT2G28100 FUC1, ATFUC1 alpha-L-fucosidase 1 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004560 alpha-L-fucosidase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000933 Glyco_hydro_29 24 175
No external refs found!