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AT5G58470 (TAF15b)


Aliases : TAF15b

Description : TBP-associated factor 15B


Gene families : OG0003283 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003283_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G58470

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00073330 TAF15b,... Transcription initiation factor TFIID subunit 15b... 0.05 OrthoFinder output from all 47 species
Ala_g17639 TAF15b not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13937 TAF15b not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07541 TAF15b not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G014000.1 TAF15b, Ceric.19G014000 not classified & original description: pacid=50575256... 0.04 OrthoFinder output from all 47 species
LOC_Os01g07070.2 TAF15b, LOC_Os01g07070 Transcription initiation factor TFIID subunit 15b... 0.07 OrthoFinder output from all 47 species
MA_10427252g0010 TAF15b Transcription initiation factor TFIID subunit 15b... 0.06 OrthoFinder output from all 47 species
Ppi_g11892 TAF15b not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g082220.4.1 TAF15b, Solyc06g082220 Transcription initiation factor TFIID subunit 15b... 0.04 OrthoFinder output from all 47 species
Zm00001e016824_P001 TAF15b, Zm00001e016824 Transcription initiation factor TFIID subunit 15b... 0.06 OrthoFinder output from all 47 species
Zm00001e025837_P001 TAF15b, Zm00001e025837 Transcription initiation factor TFIID subunit 15b... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 282 311
IPR001876 Znf_RanBP2 84 115
No external refs found!