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Aliases : ECT10
Description : evolutionarily conserved C-terminal region 10
Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G58190 | |
| Cluster | HCCA: Cluster_143 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G27960 | ECT9 | evolutionarily conserved C-terminal region 9 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G17330 | ECT6 | evolutionarily conserved C-terminal region 6 | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g11511 | ECT5 | methylation reader *(ECT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene27732.t2 | ECT5, Aspi01Gene27732 | methylation reader *(ECT) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05658 | ECT2 | methylation reader *(ECT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35979 | No alias | methylation reader *(ECT) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06830 | ECT8 | methylation reader *(ECT) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007275 | YTH_domain | 325 | 462 |
| No external refs found! |