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  5. AT5G57900

AT5G57900 (SKIP1)


Aliases : SKIP1

Description : SKP1 interacting partner 1


Gene families : OG0000527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G57900

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022415001 FBW2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Lfl_g12005 SKIP1 substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.05 OrthoFinder output from all 47 species
MA_616192g0010 SKIP1 Putative F-box/LRR-repeat protein 19 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pnu_g04451 No alias substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007165 signal transduction RCA Interproscan
BP GO:0009755 hormone-mediated signaling pathway RCA Interproscan
CC GO:0019005 SCF ubiquitin ligase complex IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005775 vacuolar lumen IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0019374 galactolipid metabolic process IEP HCCA
BP GO:0019375 galactolipid biosynthetic process IEP HCCA
MF GO:0019776 Atg8 ligase activity IEP HCCA
MF GO:0019779 Atg8 activating enzyme activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 137 151
No external refs found!