AT5G57655

Description : xylose isomerase family protein

Gene families : OG0006915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006915_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G57655

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00197750	evm_27.TU.AmTr_v1...	Enzyme classification.EC_5 isomerases.EC_5.3...	0.04	OrthoFinder output from all 47 species
GSVIVT01029114001	No alias	Xylose isomerase OS=Arabidopsis thaliana	0.08	OrthoFinder output from all 47 species
Mp8g17370.1	No alias	Xylose isomerase OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Smo161472	No alias	Xylose isomerase OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Zm00001e010929_P001	Zm00001e010929	Xylose isomerase OS=Hordeum vulgare...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009045	xylose isomerase activity	ISS	Interproscan
CC	GO:0016020	membrane	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016860	intramolecular oxidoreductase activity	None	Extended
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!