LOC_Os01g19490 (Os01g0301000)


Aliases : Os01g0301000

Description : 27.3.67 RNA.regulation of transcription.putative transcription regulator Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000285 (Gene family) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g19490
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT4G01990 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
GSVIVT01002065001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
GSVIVT01014363001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
GSVIVT01020533001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc02g078330.3.1 Solyc02g078330.3 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc02g078350.3.1 Solyc02g078350.3 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc06g005140.3.1 Solyc06g005140.3 No description available 0.03 Gene family
Solyc07g054100.2.1 Solyc07g054100.2 27.3.67 RNA.regulation of transcription.putative... 0.04 Gene family
Zm00001d009122 GRMZM2G143777 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 238
IPR002885 Pentatricopeptide_repeat 159 188
IPR002885 Pentatricopeptide_repeat 372 398
IPR002885 Pentatricopeptide_repeat 264 290
No external refs found!