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  5. AT5G57010

AT5G57010


Description : calmodulin-binding family protein


Gene families : OG0002150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G57010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00135420 evm_27.TU.AmTr_v1... IQ domain-containing protein IQM4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01015178001 No alias IQ domain-containing protein IQM4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01017097001 No alias IQ domain-containing protein IQM1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01035381001 EDA39 IQ domain-containing protein IQM1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_01832 No alias IQ domain-containing protein IQM6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_10224 No alias IQ domain-containing protein IQM2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g38980.1 EDA39, LOC_Os01g38980 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os05g10840.2 LOC_Os05g10840 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g43970.1 LOC_Os07g43970 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_52703g0010 No alias IQ domain-containing protein IQM3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_63468g0010 No alias IQ domain-containing protein IQM2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Pir_g35617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005800.3.1 Solyc01g005800 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc07g040710.3.1 Solyc07g040710 IQ domain-containing protein IQM1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g085610.2.1 Solyc10g085610 IQ domain-containing protein IQM3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g008960.2.1 Solyc12g008960 IQ domain-containing protein IQM1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e020488_P001 Zm00001e020488 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e038131_P002 Zm00001e038131 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e042223_P001 Zm00001e042223 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010224 response to UV-B IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!