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AT5G56190


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0001520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G56190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00064900 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
Dac_g09275 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
LOC_Os03g26870.1 LOC_Os03g26870 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g31560.1 LOC_Os08g31560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g13972 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
MA_64039g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g30614 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g20773 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e004207_P002 Zm00001e004207 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e031051_P005 Zm00001e031051 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000266 mitochondrial fission IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004722 protein serine/threonine phosphatase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 303 341
No external refs found!