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  5. AT5G54940

AT5G54940


Description : Translation initiation factor SUI1 family protein


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54940

Target Alias Description ECC score Gene Family Method Actions
Ala_g00314 No alias assembly factor (eIF1) of eIF1 & original description: none 0.06 OrthoFinder output from all 47 species
Als_g42471 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43105 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013936 No alias assembly factor (eIF1) of eIF1 & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0359.g066860 No alias assembly factor (eIF1) of eIF1 & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s2629.g112458 No alias assembly factor (eIF1) of eIF1 & original description: CDS=18-188 0.02 OrthoFinder output from all 47 species
Ceric.13G021900.1 Ceric.13G021900 assembly factor (eIF1) of eIF1 & original description:... 0.05 OrthoFinder output from all 47 species
Cre06.g298100 No alias Protein biosynthesis.translation... 0.03 OrthoFinder output from all 47 species
Ehy_g27923 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09385 No alias assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
Gb_27474 No alias assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
LOC_Os01g58220.1 LOC_Os01g58220 assembly factor (eIF1) of eIF1 0.05 OrthoFinder output from all 47 species
LOC_Os05g41900.1 LOC_Os05g41900 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
Lfl_g25397 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
MA_5949706g0010 No alias assembly factor (eIF1) of eIF1 0.05 OrthoFinder output from all 47 species
Ore_g12786 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c6_4020V3.1 Pp3c6_4020 Translation initiation factor SUI1 family protein 0.03 OrthoFinder output from all 47 species
Solyc07g064620.2.1 Solyc07g064620 assembly factor (eIF1) of eIF1 0.04 OrthoFinder output from all 47 species
Solyc10g006470.3.1 Solyc10g006470 assembly factor (eIF1) of eIF1 0.06 OrthoFinder output from all 47 species
Spa_g03167 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36010 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37404 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019581_P001 Zm00001e019581 assembly factor (eIF1) of eIF1 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity ISS Interproscan
BP GO:0006413 translational initiation ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 27 101
No external refs found!