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AT5G54700


Description : Ankyrin repeat family protein


Gene families : OG0003154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54700

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00179220 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00026260 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00146120 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G07710 No alias Ankyrin repeat family protein 0.02 OrthoFinder output from all 47 species
AT1G10340 No alias Ankyrin repeat family protein 0.07 OrthoFinder output from all 47 species
AT1G34050 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT2G24600 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT2G31820 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT5G54710 No alias Ankyrin repeat family protein 0.08 OrthoFinder output from all 47 species
Aev_g02439 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035638001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_06243 ITN1 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_13076 ITN1 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_13078 ITN1 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_27214 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_122773g0010 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g014570.3.1 Solyc08g014570 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Solyc08g066770.3.1 Solyc08g066770 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g005860.3.1 Solyc09g005860 Ankyrin repeat-containing protein At5g02620... 0.09 OrthoFinder output from all 47 species
Zm00001e010178_P002 Zm00001e010178 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR026961 PGG_dom 208 316
IPR020683 DUF3447 7 108
No external refs found!