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  5. AT5G54370

AT5G54370


Description : Late embryogenesis abundant (LEA) protein-related


Gene families : OG0000676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G54370
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00003p00264210 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00040p00170390 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g053480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59886 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59477.t1 Aspi01Gene59477 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000108 No alias not classified & original description: CDS=110-1192 0.03 OrthoFinder output from all 47 species
Azfi_s0208.g058017 No alias not classified & original description: CDS=1-834 0.02 OrthoFinder output from all 47 species
Azfi_s0478.g073054 No alias not classified & original description: CDS=1-1137 0.03 OrthoFinder output from all 47 species
Azfi_s2640.g112481 No alias not classified & original description: CDS=1-1137 0.04 OrthoFinder output from all 47 species
Ceric.10G068800.1 Ceric.10G068800 not classified & original description: pacid=50613531... 0.03 OrthoFinder output from all 47 species
Ceric.10G068900.1 Ceric.10G068900 not classified & original description: pacid=50613305... 0.04 OrthoFinder output from all 47 species
Ceric.26G032000.1 Ceric.26G032000 not classified & original description: pacid=50599460... 0.08 OrthoFinder output from all 47 species
Ceric.26G032300.1 Ceric.26G032300 not classified & original description: pacid=50600130... 0.05 OrthoFinder output from all 47 species
Dcu_g29247 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g31810 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g10721 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01005845001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01034762001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_15126 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_38738 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73700.1 LOC_Os01g73700 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g73710.1 LOC_Os01g73710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g73720.1 LOC_Os01g73720 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g73730.1 LOC_Os01g73730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g01680.1 LOC_Os05g01680 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os05g47940.1 LOC_Os05g47940 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os11g05360.1 LOC_Os11g05360 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g22428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_6494080g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_6771381g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_74876g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7605738g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_8955g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_957739g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g03490.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g11810.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g07970.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g08760.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pp3c11_5670V3.1 Pp3c11_5670 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c1_3090V3.1 Pp3c1_3090 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g33257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g64383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107710.2.1 Solyc01g107710 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc01g107720.3.1 Solyc01g107720 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc02g078930.3.1 Solyc02g078930 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc06g034130.2.1 Solyc06g034130 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc11g069280.2.1 Solyc11g069280 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc11g073140.2.1 Solyc11g073140 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc11g073150.1.1 Solyc11g073150 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Spa_g37296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002062_P001 Zm00001e002062 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e018525_P001 Zm00001e018525 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e018526_P001 Zm00001e018526 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e018527_P001 Zm00001e018527 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e021386_P001 Zm00001e021386 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e024129_P001 Zm00001e024129 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e028269_P001 Zm00001e028269 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e029686_P001 Zm00001e029686 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048829 root cap development IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR009646 Root_cap 246 302
No external refs found!