AT5G53905

Description : unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1278 (InterPro:IPR010701); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54062.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

Gene families : OG0007016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007016_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G53905
Cluster	HCCA: Cluster_25

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G48210	No alias	Protein of unknown function (DUF1278)	0.05	OrthoFinder output from all 47 species
Solyc12g009850.1.1	Solyc12g009850	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004536	deoxyribonuclease activity	IEP	HCCA
MF	GO:0004565	beta-galactosidase activity	IEP	HCCA
MF	GO:0004659	prenyltransferase activity	IEP	HCCA
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	HCCA
MF	GO:0008146	sulfotransferase activity	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
MF	GO:0015925	galactosidase activity	IEP	HCCA
BP	GO:0016093	polyprenol metabolic process	IEP	HCCA
BP	GO:0016094	polyprenol biosynthetic process	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
BP	GO:0019348	dolichol metabolic process	IEP	HCCA
BP	GO:0019408	dolichol biosynthetic process	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0045547	dehydrodolichyl diphosphate synthase activity	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
MF	GO:1990135	flavonoid sulfotransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008502	Prolamin-like	27	83

External Links

No external refs found!

AT5G53905

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation