1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G53500

AT5G53500


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G53500

Target Alias Description ECC score Gene Family Method Actions
Cre06.g276100 No alias No description available 0.01 OrthoFinder output from all 47 species
Nbi_g18665 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e040851_P001 Zm00001e040851 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041942_P002 Zm00001e041942 COMPASS-like H3K4 histone methylase component WDR5B... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0007165 signal transduction ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 319 355
IPR001680 WD40_repeat 217 249
IPR001680 WD40_repeat 360 397
No external refs found!