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AT5G52882


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52882
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Adi_g023417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g43480.1 LOC_Os01g43480 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
MA_41988g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0034406 cell wall beta-glucan metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 554 684
No external refs found!