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  5. AT5G52720

AT5G52720


Description : Copper transport protein family


Gene families : OG0020084 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020084_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52720
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT5G52670 No alias Copper transport protein family 0.04 OrthoFinder output from all 47 species
AT5G52680 No alias Copper transport protein family 0.05 OrthoFinder output from all 47 species
AT5G52690 No alias Copper transport protein family 0.03 OrthoFinder output from all 47 species
AT5G52700 No alias Copper transport protein family 0.05 OrthoFinder output from all 47 species
AT5G52710 No alias Copper transport protein family 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
MF GO:0046872 metal ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004551 dinucleotide phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
MF GO:0035529 NADH pyrophosphatase activity IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0047631 ADP-ribose diphosphatase activity IEP HCCA
BP GO:0048584 positive regulation of response to stimulus IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0080151 positive regulation of salicylic acid mediated signaling pathway IEP HCCA
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!