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  5. AT5G52500

AT5G52500


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0002178 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52500
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT3G57400 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g021691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30831.t1 Aspi01Gene30831 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33885.t1 Aspi01Gene33885 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0573.g078043 No alias not classified & original description: CDS=1-2142 0.03 OrthoFinder output from all 47 species
Ceric.26G048200.1 Ceric.26G048200 not classified & original description: pacid=50599184... 0.04 OrthoFinder output from all 47 species
Dac_g00954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_62021g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g01440.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g14629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c23_16170V3.1 Pp3c23_16170 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g17226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g015850.3.1 Solyc04g015850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g079390.1.1 Solyc10g079390 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g51509 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g45161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042371 vitamin K biosynthetic process IEP HCCA
BP GO:0042372 phylloquinone biosynthetic process IEP HCCA
BP GO:0042373 vitamin K metabolic process IEP HCCA
BP GO:0042374 phylloquinone metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044347 cell wall polysaccharide catabolic process IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
MF GO:0047617 acyl-CoA hydrolase activity IEP HCCA
BP GO:0080001 mucilage extrusion from seed coat IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!