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AT5G52280


Description : Myosin heavy chain-related protein


Gene families : OG0000964 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G52280

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00223040 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g19712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09919.t1 Aspi01Gene09919 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023862 No alias not classified & original description: CDS=554-2527 0.02 OrthoFinder output from all 47 species
GSVIVT01008970001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01008971001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os03g01710.1 LOC_Os03g01710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g21940.1 LOC_Os10g21940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g36060.1 LOC_Os10g36060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g08370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo425588 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g072630.4.1 Solyc04g072630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g080780.4.1 Solyc08g080780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e004411_P002 Zm00001e004411 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e012583_P001 Zm00001e012583 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018560_P002 Zm00001e018560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005834 heterotrimeric G-protein complex IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
CC GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
CC GO:1905360 GTPase complex IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 9 142
No external refs found!