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  5. AT5G50590

AT5G50590 (HSD4, AtHSD4)


Aliases : HSD4, AtHSD4

Description : hydroxysteroid dehydrogenase 4


Gene families : OG0001335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G50590

Target Alias Description ECC score Gene Family Method Actions
AT3G47350 HSD2, ATHSD2 hydroxysteroid dehydrogenase 2 0.05 OrthoFinder output from all 47 species
AT4G10020 AtHSD5, HSD5 hydroxysteroid dehydrogenase 5 0.03 OrthoFinder output from all 47 species
AT5G50600 HSD1, ATHSD1 hydroxysteroid dehydrogenase 1 0.03 OrthoFinder output from all 47 species
AT5G50700 HSD1 hydroxysteroid dehydrogenase 1 0.03 OrthoFinder output from all 47 species
Aspi01Gene09763.t1 HSD1, ATHSD1,... EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dac_g16129 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01000915001 HSD1, ATHSD1 Lipid metabolism.lipid bodies-associated activities.steroleosin 0.04 OrthoFinder output from all 47 species
Nbi_g28788 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ore_g28788 HSD1, ATHSD1 STEROLEOSIN-type dehydrogenase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25699 AtHSD5, HSD5 STEROLEOSIN-type dehydrogenase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26933 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Ppi_g56425 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ppi_g56426 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Zm00001e021421_P002 HSD1, ATHSD1,... steroleosin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
MF GO:0016491 oxidoreductase activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 48 234
No external refs found!