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AT5G50270


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0004270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G50270

Target Alias Description ECC score Gene Family Method Actions
AT1G19410 No alias FBD / Leucine Rich Repeat domains containing protein 0.01 OrthoFinder output from all 47 species
AT1G32375 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from all 47 species
AT4G10400 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT5G56810 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006863 purine nucleobase transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:2000008 regulation of protein localization to cell surface IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 153 178
IPR006566 FBD 324 367
No external refs found!