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  5. AT5G48190

AT5G48190


Description : Domain of unknown function (DUF23)


Gene families : OG0000987 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000987_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G48190
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Ala_g08514 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Als_g15211 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Aob_g16965 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38324.t1 Aspi01Gene38324 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G084100.1 Ceric.13G084100 beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01013454001 No alias Cell wall.pectin.rhamnogalacturonan... 0.04 OrthoFinder output from all 47 species
Len_g31799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g42556 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
MA_401686g0010 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Mp1g18380.1 No alias beta-1,4-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Mp4g07890.1 No alias Galactan beta-1,4-galactosyltransferase GALS2... 0.02 OrthoFinder output from all 47 species
Mp6g19260.1 No alias beta-1,4-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Mp7g09030.1 No alias beta-1,4-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Msp_g19163 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.03 OrthoFinder output from all 47 species
Sam_g43928 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Tin_g23937 No alias beta-1,4-galactosyltransferase *(GALS) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e037549_P001 Zm00001e037549 beta-1,4-galactosyltransferase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
MF GO:0015415 ATPase-coupled phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043225 ATPase-coupled inorganic anion transmembrane transporter activity IEP HCCA
BP GO:1901684 arsenate ion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 2 101
No external refs found!