AT5G45970 (ARAC2, RAC2, ATRAC2,...)

Aliases : ARAC2, RAC2, ATRAC2, ROP7, ATROP7

Description : RAC-like 2

Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G45970
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00186910	ATRAC11, ARAC11,...	Multi-process regulation.Rop GTPase regulatory...	0.08	OrthoFinder output from all 47 species
Adi_g003765	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g051540	ATRAC11, ARAC11,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g068546	ATROP4, ROP4,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g13243	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g23892	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g25534	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g39511	ATROP4, ROP4,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g01235	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g03825	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g06146	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g48079	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g04124	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06422	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g03732	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene35809.t1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g14199	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g14200	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.38G025400.1	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g03585	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g04531	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.06	OrthoFinder output from all 47 species
Dac_g37057	ATRAC11, ARAC11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g42232	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07418	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g08696	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g09488	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g17256	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g03202	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g20297	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g51070	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07708	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18052	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01018729001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.04	OrthoFinder output from all 47 species
GSVIVT01020653001	ATROP4, ROP4,...	Multi-process regulation.Rop GTPase regulatory...	0.11	OrthoFinder output from all 47 species
GSVIVT01021145001	ARAC2, RAC2,...	Multi-process regulation.Rop GTPase regulatory...	0.1	OrthoFinder output from all 47 species
GSVIVT01024029001	ATRAC1, ROP3,...	Multi-process regulation.Rop GTPase regulatory...	0.09	OrthoFinder output from all 47 species
Gb_16923	ATRAC11, ARAC11,...	small GTPase (ROP)	0.05	OrthoFinder output from all 47 species
LOC_Os02g20850.1	ATRAC1, ROP3,...	small GTPase (ROP)	0.1	OrthoFinder output from all 47 species
LOC_Os02g50860.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.07	OrthoFinder output from all 47 species
LOC_Os05g43820.1	ARAC7, ROP9,...	small GTPase (ROP)	0.04	OrthoFinder output from all 47 species
LOC_Os06g12790.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.07	OrthoFinder output from all 47 species
Len_g29377	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g29379	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g37231	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05339	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10426447g0010	ATRAC4, ARAC4,...	small GTPase (ROP)	0.07	OrthoFinder output from all 47 species
MA_184760g0010	ATRAC11, ARAC11,...	small GTPase (ROP)	0.03	OrthoFinder output from all 47 species
MA_36432g0010	ARAC3, RAC3,...	small GTPase (ROP)	0.05	OrthoFinder output from all 47 species
Msp_g11271	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g38983	ATRAC11, ARAC11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01865	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g09513	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g13115	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g29105	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g04924	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g14285	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010162	ATROP4, ROP4,...	not classified & original description: CDS=1-690	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012576	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: CDS=1-624	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024188	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: CDS=374-982	0.02	OrthoFinder output from all 47 species
Sam_g04900	No alias	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g51099	No alias	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g51141	No alias	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g088780.3.1	ARAC9, ATROP8,...	small GTPase (ROP)	0.02	OrthoFinder output from all 47 species
Solyc02g077400.4.1	ARAC2, RAC2,...	small GTPase (ROP)	0.25	OrthoFinder output from all 47 species
Solyc03g114070.3.1	ATRAC8, ATROP10,...	small GTPase (ROP)	0.03	OrthoFinder output from all 47 species
Solyc07g020800.3.1	ARAC7, ROP9,...	small GTPase (ROP)	0.03	OrthoFinder output from all 47 species
Spa_g01671	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g10601	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g29989	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.07	OrthoFinder output from all 47 species
Spa_g36415	ARAC3, RAC3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g52292	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03089	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03146	ATRAC11, ARAC11,...	small GTPase *(ROP) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g10479	ARAC3, RAC3,...	small GTPase *(ROP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e036080_P001	ATRAC8, ATROP10,...	small GTPase (ROP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0007015	actin filament organization	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009900	dehiscence	IEP	HCCA
BP	GO:0009901	anther dehiscence	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010215	cellulose microfibril organization	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
CC	GO:0016324	apical plasma membrane	IEP	HCCA
BP	GO:0017157	regulation of exocytosis	IEP	HCCA
BP	GO:0030198	extracellular matrix organization	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030833	regulation of actin filament polymerization	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032271	regulation of protein polymerization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
BP	GO:0043062	extracellular structure organization	IEP	HCCA
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0051046	regulation of secretion	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051648	vesicle localization	IEP	HCCA
BP	GO:0051650	establishment of vesicle localization	IEP	HCCA
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:1900378	positive regulation of secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:1901141	regulation of lignin biosynthetic process	IEP	HCCA
BP	GO:1901428	regulation of syringal lignin biosynthetic process	IEP	HCCA
BP	GO:1901430	positive regulation of syringal lignin biosynthetic process	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1903530	regulation of secretion by cell	IEP	HCCA
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	HCCA
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	177

External Links

No external refs found!

AT5G45970 (ARAC2, RAC2, ATRAC2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation